Update - So I switched back to stock 110mm stem except mounted +7 degrees. I found that the 90mm stem brought the hoods to the correct stack I wanted, but they were a bit too close to me. The performance was still quite good though. Maybe a 100mm stem would have been better?
Would you guys recommend changing the 39/53 crankset to a 34/50, 36/50 or 36/52?